Hi Chris,
I hope all goes well with the change of pots, just remember, try not to disturb the roots too much and if they are wet through, leave them for a day or two to settle in to their new pots.
I have taken a couple of pics of some chillies i have growing at the moment. They were started early, as they require a long time to set fruit, (about 120 days for the "Nagas" & "Bhut Jolokia") these are some of the "Super Hots".
The little plant in the black pot, is a "Thai variety" (little yellow) which has a couple of flowers setting already
I also grow "Prairie Fire" which can stay on a windowsill indoors,throughout the season, as they dont grow too big.
Good luck with your plants, hope they make it through, cheers stupo